Browsing Universitätsbibliographie by Author "Wrzodek, Clemens"

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A Toxicogenomic Approach for the Prediction of Murine Hepatocarcinogenesis Using Ensemble Feature Selection

Eichner, Johannes; Kossler, Nadine; Wrzodek, Clemens; Kalkuhl, Arno; Toft, Dorthe Bach; Ostenfeldt, Nina; Richard, Virgile; Zell, Andreas (2013)
Evaluation of Toxicogenomics Approaches for Assessing the Risk of Nongenotoxic Carcinogenicity in Rat Liver

Eichner, Johannes; Wrzodek, Clemens; Roemer, Michael; Ellinger-Ziegelbauer, Heidrun; Zell, Andreas (2014)
Ha-ras and beta-catenin oncoproteins orchestrate metabolic programs in mouse liver tumors

Unterberger, Elif B.; Eichner, Johannes; Wrzodek, Clemens; Lempiaeinen, Harri; Luisier, Raphaelle; Terranova, Remi; Metzger, Ute; Plummer, Simon; Knorpp, Thomas; Braeuning, Albert; Moggs, Jonathan; Templin, Markus F.; Honndorf, Valerie; Piotto, Martial; Zell, Andreas; Schwarz, Michael (2014)
Identification of Dlk1-Dio3 Imprinted Gene Cluster Noncoding RNAs as Novel Candidate Biomarkers for Liver Tumor Promotion

Lempiainen, Harri; Couttet, Philippe; Bolognani, Federico; Mueller, Arne; Dubost, Valerie; Luisier, Raphaelle; Espinola, Alberto Del Rio; Vitry, Veronique; Unterberger, Elif B.; Thomson, John P.; Treindl, Fridolin; Metzger, Ute; Wrzodek, Clemens; Hahne, Florian; Zollinger, Tulipan; Brasa, Sarah; Kalteis, Magdalena; Marcellin, Magali; Giudicelli, Fanny; Braeuning, Albert; Morawiec, Laurent; Zamurovic, Natasa; Laengle, Ulrich; Scheer, Nico; Schuebeler, Dirk; Goodman, Jay; Chibout, Salah-Dine; Marlowe, Jennifer; Theil, Diethilde; Heard, David J.; Grenet, Olivier; Zell, Andreas; Templin, Markus F.; Meehan, Richard R.; Wolf, Roland C.; Elcombe, Clifford R.; Schwarz, Michael; Moulin, Pierre; Terranova, Remi; Moggs, Jonathan G. (2013)
InCroMAP: integrated analysis of cross-platform microarray and pathway data

Wrzodek, Clemens; Eichner, Johannes; Buchel, Finja; Zell, Andreas (2013)
Inference and integration of biochemical networks with multilayered omics data / 1. Aufl.

Wrzodek, Clemens (2013)
Inferring statin-induced gene regulatory relationships in primary human hepatocytes

Schröder, Adrian; Wollnik, Johannes; Wrzodek, Clemens (2011)
Inferring transcriptional regulators for sets of co-expressed genes by multi-objective evolutionary optimization

Schröder, Adrian; Wrzodek, Celemns; Wollnik, Johannes (2011)
Integrated enrichment analysis and pathway-centered visualization of metabolomics, proteomics, transcriptomics, and genomics data by using the InCroMAP software

Eichner, Johannes; Rosenbaum, Lars; Wrzodek, Clemens; Haering, Hans-Ulrich; Zell, Andreas; Lehmann, Rainer (2014)
Integrative Pathway-Based Approach for Genome-Wide Association Studies: Identification of New Pathways for Rheumatoid Arthritis and Type 1 Diabetes

Buechel, Finja; Mittag, Florian; Wrzodek, Clemens; Zell, Andreas; Gasser, Thomas; Sharma, Manu (2013)
JSBML 1.0: providing a smorgasbord of options to encode systems biology models

Rodriguez, Nicolas; Thomas, Alex; Watanabe, Leandro; Vazirabad, Ibrahim Y.; Kofia, Victor; Gomez, Harold F.; Mittag, Florian; Matthes, Jakob; Rudolph, Jan; Wrzodek, Finja; Netz, Eugen; Diamantikos, Alexander; Eichner, Johannes; Keller, Roland; Wrzodek, Clemens; Froehlich, Sebastian; Lewis, Nathan E.; Myers, Chris J.; Le Novere, Nicolas; Palsson, Bernhard O.; Hucka, Michael; Draeger, Andreas (2015)
JSBML: a flexible Java library for working with SBML

Dräger, Andreas; Rodriguez, Nicolas; Dumousseau, Marine (2011)
KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats

Wrzodek, Clemens; Dräger, Andreas; Zell, Andreas (2011)
Linking the Epigenome to the Genome: Correlation of Different Features to DNA Methylation of CpG Islands

Wrzodek, Clemens; Buechel, Finja; Hinselmann, Georg; Eichner, Johannes; Mittag, Florian; Zell, Andreas (2012)
ModuleMaster: A new tool to decipher transcriptional regulatory networks

Wrzodek, Clemens; Schröder, Adrian; Dräger, Andreas (2010)
Parkinson's disease: dopaminergic nerve cell model is consistent with experimental finding of increased extracellular transport of alpha-synuclein

Buechel, Finja; Saliger, Sandra; Draeger, Andreas; Hoffmann, Stephanie; Wrzodek, Clemens; Zell, Andreas; Kahle, Philipp J. (2013)
Path2Models: large-scale generation of computational models from biochemical pathway maps

Buechel, Finja; Rodriguez, Nicolas; Swainston, Neil; Wrzodek, Clemens; Czauderna, Tobias; Keller, Roland; Mittag, Florian; Schubert, Michael; Glont, Mihai; Golebiewski, Martin; van Iersel, Martijn; Keating, Sarah; Rall, Matthias; Wybrow, Michael; Hermjakob, Henning; Hucka, Michael; Kell, Douglas B.; Mueller, Wolfgang; Mendes, Pedro; Zell, Andreas; Chaouiya, Claudine; Saez-Rodriguez, Julio; Schreiber, Falk; Laibe, Camille; Draeger, Andreas; Le Novere, Nicolas (2013)
Pathway-based visualization of cross-platform microarray datasets

Wrzodek, Clemens; Eichner, Johannes; Zell, Andreas (2012)
Precise generation of systems biology models from KEGG pathways

Wrzodek, Clemens; Buechel, Finja; Ruff, Manuel; Draeger, Andreas; Zell, Andreas (2013)
ProDGe: investigating protein-protein interactions at the domain level

Büchel, Finja; Wrzodek, Clemens; Mittag, Florian (2011)

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